Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904314.1_cds_XP_016454466.1_48490
CDS Infomation

[gene=LOC107778693] [db_xref=GeneID:107778693] [protein=uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic-like] [protein_id=XP_016454466.1] [location=complement(join(15866..16039,16368..16484,16762..16940,17724..17821,17912..18177,18771..18926,19039..19227,19498..19611,20850..20992,22014..22140,22222..22287))] [gbkey=CDS]
Sequence

ATGGCAGTAGTTACAGTGTTAAGGGGCGTCTCTCATGGCCGCTTACCACTACTCCCCCAC
TCTCAGTTGCCAATTGTAAGCGTCACAGGTAGACCAAGAAACATTGGTTATTATGGGAAT
CATCGTCCCAATTTTTTGCGAATTTATGCTCGTTATTCACAGGCTCAGGATCTATTTACC
ACTCGTCTTCAAGATCGTCTAGAGAACTTGCCCAAACTTGTGGAGGATATTGTCCAAACA
TCTCTAAACACAGGTCCTCGTGGAGTCTTAAGGCTAGCTCAGGGTGTCCAAGCTGTAGTT
GGAGTAGGCAGCGAGTGGCTGCAAGACGTATCTAAGACAGCAAACTCATCCACGGGACTA
CCAACTCAGCTGCAGCTTGGGCTATTATCTCCCCTATATTTGAGGAAATTGTTTGAACGC
ATGGGTGCAACTTACATCAAATTAGGTCAGTTTATTGCCTCCGCACCCACGTTGTTTCCA
CCAGAGTATGTTCAAGAATTCCAGTACTGTTTTGACAGGGCTCCTGCAGTTCCTTTTGAA
GAGATCCAAACAATCTTGCGTGAGGAACTAGGCAGACCAATTGATACCGTGTTTGAGTAT
ATTGATCCCACACCACTTGCCTCTGCATCAATTGCTCAGGTGCATGGTGCAAGGATAAGA
GGCACAGGAGAGGATGTAGTGATAAAGGTTTTGAAACCTGGAATCGAAGATATTTTGGTA
GCAGATCTGAACTTTGTGTACATTGTAGCACGTATCCTGGAGTTTTTGAGTCCTGATCTA
AGCCGTGCATCTCTGGTTGCCATTGTCAAAGATATACGAGAATCAATGCTAGAAGAAGTT
GACTTCAAGAAGGAGGCTGCAAATGTTGAGTCATTCAGGAGGTATTTAGAAGCCATGGGA
CTTACTAAGCAGGCCACTGCTCCAAAAGTCTACCCTCTATGTAGTACTAAGCGTGTTCTG
ACAATGGAGAGGCTATATGGAGTTCCTTTGACGGACTTAGACTTCATTAAGTCACTGGTA
TCTAGTCCTGAGACCAGTCTTATTACTGCCCTAAATGTTTGGTTCGGAAGTCTGCTCGCC
TGTGAATCCTTCCACGCAGATGTACATGCTGGCAATTTGTGGCAACTACGTGATGGGCGT
ATTGGGTTCCTTGACTTCGGAATTGTTGGTCGTATATCTCCAAAGACATGGGCTGCTATG
GAAGTATTTCTGCAATCTATAGCAATTGAAGATTATGAGTCGATGGCATCTGCTCTAATT
GACATGGGTGCTACTGGAAAGGATGTGGATTCAAAGGCTTTTGCGAGCGACTTGGAGAAA
ATATTTTTGTCAATTCAGGATTTGGATACCGAAATCATTGTTGCTGCTGCAAGGGACACA
AATACAAATGCAACCGCTGTCGCTGCCAATGTAGTATTTGATGAGAGGCAGATGAATGCT
CTATTTGTGGACGTGGTTAGAGTTAGTGAATCTTACGGATTGAAATTTCCTCGTGAGTTT
GCACTTCTGTTGAAGCAACTTCTCTATTTTGACCGATACACCAGATTGTTAGCTCCAAAT
ATGAACATGTACCGAGATCGGAGGATAAAGCTTGTCTCTGATCGAAGACAAAGGAACATA
TACCAATGA

Peptide Sequence

PEP ID

XP_016454466.1
PEP Infomation

PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVVTVLRGVSHGRLPLLPHSQLPIVSVTGRPRNIGYYGNHRPNFLRIYARYSQAQDLFT
TRLQDRLENLPKLVEDIVQTSLNTGPRGVLRLAQGVQAVVGVGSEWLQDVSKTANSSTGL
PTQLQLGLLSPLYLRKLFERMGATYIKLGQFIASAPTLFPPEYVQEFQYCFDRAPAVPFE
EIQTILREELGRPIDTVFEYIDPTPLASASIAQVHGARIRGTGEDVVIKVLKPGIEDILV
ADLNFVYIVARILEFLSPDLSRASLVAIVKDIRESMLEEVDFKKEAANVESFRRYLEAMG
LTKQATAPKVYPLCSTKRVLTMERLYGVPLTDLDFIKSLVSSPETSLITALNVWFGSLLA
CESFHADVHAGNLWQLRDGRIGFLDFGIVGRISPKTWAAMEVFLQSIAIEDYESMASALI
DMGATGKDVDSKAFASDLEKIFLSIQDLDTEIIVAAARDTNTNATAVAANVVFDERQMNA
LFVDVVRVSESYGLKFPREFALLLKQLLYFDRYTRLLAPNMNMYRDRRIKLVSDRRQRNI
YQ

Transcript Sequence

Gene sequence data has not been registered.